ORMIR - Working groups

Ciclope is a tool to create micro finite element (microFE) models from micro computed tomography (microCT) 3D images
Coordinators: Gianluca Iori and Martino Pani
HipPyFemur is a tool to create finite elements models of the hip from computed tomography (CT) images
Coordinator: Lorenzo Grassi

ORMIR_XCT is a Python package for processing high resolution peripheral computed tomography (HR-pQCT) images
Coordinator: Michael Kuczynski

pyKNEEr is a tool for open and reproducible segmentation and analysis of knee magnetic resonance images
Coordinator: Serena Bonaretti

Dafne (Deep Anatomical Federated Network) is a collaborative platform to annotate MRI images and train machine learning models without your data ever leaving your machine.
Coordinator: Francesco Santini

ORMIR-MIDS is a tool for open and reproducible segmentation and analysis of knee magnetic resonance images
Coordinators: Francesco Santini and Donnie Cameron
UMUD (Universal Musculoskeletal Ultrasonography Database) is a web application designed to provide easy access to ultrasonography datasets.
Coordinators: Paul Ritsche and Fabio Sarto
Data sharing guidelines are meant to support MSK imaging researchers in sharing their data
Coordinators: Sarah Manske and Serena Bonaretti

We are developing a fully automated pipeline to generate a patient-specific finite element model from low-resolution clinical MRI using deep learning-based segmentation and statistical shape modeling
Coordinator: Fabio Galbusera